CovidSim

Useful links

mrc-ide/covid-sim on GitHub

Versions

The currently installed version is 0.8.0

Running

Example Job Submission Scripts

x86

#!/bin/bash
#PBS -q pascalq
#PBS -N CSim-UK-bwl-18-intel
#PBS -l select=1:ncpus=18
#PBS -l walltime=00:50:00
#PBS -lplace=excl 

export OMP_PROC_BIND

module use /software/x86_64/modulefiles
module load covid-19-covidsim/0.8.0

cd ${COVIDSIM_DATA}
/usr/bin/time python3 run_sample.py \
    --covidsim CovidSim_uk \
    --outputdir /scratch/${USER}/CovidSim/out/ \
    United_Kingdom

Arm

Please enquire via isambard-supprt@gw4.ac.uk